Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
clg26h11orf1Expressed sequence EH456644. (119 aa)    
Predicted Functional Partners:
W5MHD8_LEPOC
Family with sequence similarity 183 member A.
    
 
 0.968
clg11h5orf49
Uncharacterized protein.
   
 
 0.961
LOC102686996
Cilia and flagella associated protein 126.
    
 
 0.954
ak9
Adenylate kinase 9.
    
   0.952
efhb
EF-hand domain family, member B.
   
   0.907
ccdc173
Coiled-coil domain containing 173.
   
   0.896
cfap45
Cilia and flagella associated protein 45.
    
   0.895
C9orf135
Chromosome 9 open reading frame 135.
   
   0.895
clg25h1orf158
Si:ch211-226m7.4.
   
   0.892
clg21h9orf116
Si:ch211-248e11.2.
    
   0.892
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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