STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
txndc9Thioredoxin domain containing 9. (229 aa)    
Predicted Functional Partners:
W5NNT2_LEPOC
Sulfite oxidase; Belongs to the cytochrome b5 family.
   
 0.916
fbxw4
F-box and WD repeat domain containing 4.
    
   0.752
CYB5R4
Cytochrome b5 reductase 4.
  
 0.725
LOC102692343
PMSR domain-containing protein.
   
 0.709
msra
PMSR domain-containing protein.
   
 0.709
mrps17
Mitochondrial ribosomal protein S17.
   
    0.685
cct3
T-complex protein 1 subunit gamma.
  
 
 0.659
cct7
T-complex protein 1 subunit eta; Molecular chaperone; assists the folding of proteins upon ATP hydrolysis. Known to play a role, in vitro, in the folding of actin and tubulin.
  
 
 0.621
gak
Cyclin G associated kinase.
   
 0.613
W5MSZ0_LEPOC
Zinc finger, AN1-type domain 4.
    
  0.611
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.