Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
txndc9Thioredoxin domain containing 9. (229 aa)    
Predicted Functional Partners:
cct3
T-complex protein 1 subunit gamma.
  
 0.976
fbxw4
F-box and WD repeat domain containing 4.
    
   0.974
cct7
T-complex protein 1 subunit eta; Molecular chaperone; assists the folding of proteins upon ATP hydrolysis. Known to play a role, in vitro, in the folding of actin and tubulin.
  
 0.973
cct5
Chaperonin containing TCP1, subunit 5 (epsilon).
  
 0.962
W5NH55_LEPOC
Chaperonin containing TCP1, subunit 2 (beta).
  
 0.960
WDR86
WD repeat domain 86.
    
   0.950
klhdc8a
Kelch domain containing 8A.
    
   0.939
cct6a
Chaperonin containing TCP1, subunit 6A (zeta 1).
  
 0.890
W5MFH2_LEPOC
PCF11 cleavage and polyadenylation factor subunit.
    
   0.871
W5NL52_LEPOC
Uncharacterized protein.
    
   0.862
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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