srsf6 protein (Lepisosteus oculatus) - STRING interaction network

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second shell of interactors

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[Homology]

Score

srsf6

Uncharacterized protein. (369 aa)

Predicted Functional Partners:

W5LZ72_LEPOC

0.988

srpk1

0.961

W5N908_LEPOC

0.941

srsf3

0.936

srsf1

0.915

srsf9

0.911

srsf2

0.909

NCBP1

0.898

ncbp2

0.896

u2af2

0.896

Your Current Organism:

Lepisosteus oculatus

NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
NCBP1	W5LZ72_LEPOC	ENSLOCP00000011710	ENSLOCP00000001429	Nuclear cap binding protein subunit 1.	Zgc:153681.	0.986
NCBP1	W5N908_LEPOC	ENSLOCP00000011710	ENSLOCP00000017117	Nuclear cap binding protein subunit 1.	Aly/REF export factor.	0.996
NCBP1	ncbp2	ENSLOCP00000011710	ENSLOCP00000001733	Nuclear cap binding protein subunit 1.	Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing, translation regulation, nonsense- mediated mRNA decay, RNA-mediated gene silencing (RNAi) by microRNAs (miRNAs) and mRNA export. The CBC complex is involved in mRNA export from the nucleus, leading to the recruitment of the mRNA export machinery to the 5' end of mRNA and to mRNA export in a 5' to 3' direction through the nuclear pore. The CBC complex is also involved in mediating U [...]	0.999
NCBP1	srsf1	ENSLOCP00000011710	ENSLOCP00000007242	Nuclear cap binding protein subunit 1.	Serine and arginine rich splicing factor 1b.	0.938
NCBP1	srsf2	ENSLOCP00000011710	ENSLOCP00000013821	Nuclear cap binding protein subunit 1.	Serine and arginine rich splicing factor 2a.	0.789
NCBP1	srsf3	ENSLOCP00000011710	ENSLOCP00000015413	Nuclear cap binding protein subunit 1.	Serine and arginine rich splicing factor 3a.	0.734
NCBP1	srsf6	ENSLOCP00000011710	ENSLOCP00000001644	Nuclear cap binding protein subunit 1.	Uncharacterized protein.	0.898
NCBP1	srsf9	ENSLOCP00000011710	ENSLOCP00000004826	Nuclear cap binding protein subunit 1.	Serine and arginine rich splicing factor 9.	0.928
NCBP1	u2af2	ENSLOCP00000011710	ENSLOCP00000013289	Nuclear cap binding protein subunit 1.	U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family.	0.928
W5LZ72_LEPOC	NCBP1	ENSLOCP00000001429	ENSLOCP00000011710	Zgc:153681.	Nuclear cap binding protein subunit 1.	0.986
W5LZ72_LEPOC	W5N908_LEPOC	ENSLOCP00000001429	ENSLOCP00000017117	Zgc:153681.	Aly/REF export factor.	0.998
W5LZ72_LEPOC	ncbp2	ENSLOCP00000001429	ENSLOCP00000001733	Zgc:153681.	Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing, translation regulation, nonsense- mediated mRNA decay, RNA-mediated gene silencing (RNAi) by microRNAs (miRNAs) and mRNA export. The CBC complex is involved in mRNA export from the nucleus, leading to the recruitment of the mRNA export machinery to the 5' end of mRNA and to mRNA export in a 5' to 3' direction through the nuclear pore. The CBC complex is also involved in mediating U [...]	0.983
W5LZ72_LEPOC	srsf1	ENSLOCP00000001429	ENSLOCP00000007242	Zgc:153681.	Serine and arginine rich splicing factor 1b.	0.994
W5LZ72_LEPOC	srsf2	ENSLOCP00000001429	ENSLOCP00000013821	Zgc:153681.	Serine and arginine rich splicing factor 2a.	0.976
W5LZ72_LEPOC	srsf3	ENSLOCP00000001429	ENSLOCP00000015413	Zgc:153681.	Serine and arginine rich splicing factor 3a.	0.989
W5LZ72_LEPOC	srsf6	ENSLOCP00000001429	ENSLOCP00000001644	Zgc:153681.	Uncharacterized protein.	0.988
W5LZ72_LEPOC	srsf9	ENSLOCP00000001429	ENSLOCP00000004826	Zgc:153681.	Serine and arginine rich splicing factor 9.	0.974
W5LZ72_LEPOC	u2af2	ENSLOCP00000001429	ENSLOCP00000013289	Zgc:153681.	U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family.	0.832
W5N908_LEPOC	NCBP1	ENSLOCP00000017117	ENSLOCP00000011710	Aly/REF export factor.	Nuclear cap binding protein subunit 1.	0.996
W5N908_LEPOC	W5LZ72_LEPOC	ENSLOCP00000017117	ENSLOCP00000001429	Aly/REF export factor.	Zgc:153681.	0.998