STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
clg10h1orf112Si:dkey-97o5.1. (907 aa)    
Predicted Functional Partners:
parpbp
PARP1 binding protein.
   
  
 0.543
W5ME13_LEPOC
Kinetochore associated 1.
   
  
 0.526
W5NIU6_LEPOC
Exonuclease 1.
   
  
 0.520
trip13
Thyroid hormone receptor interactor 13; Belongs to the AAA ATPase family.
   
   0.518
zwilch
Zwilch kinetochore protein.
   
    0.497
zfyve28
Zinc finger, FYVE domain containing 28.
      
 0.472
EGFLAM
EGF like, fibronectin type III and laminin G domains.
      
 0.424
mcm8
Minichromosome maintenance 8 homologous recombination repair factor; Belongs to the MCM family.
   
  
 0.422
cabin1
Calcineurin binding protein 1.
      
 0.405
enkd1
Enkurin domain containing 1.
   
  
 0.403
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.