Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
W5LZV9_LEPOCUncharacterized protein. (319 aa)    
Predicted Functional Partners:
W5M196_LEPOC
WD repeat domain 18.
   
 0.527
W5MDV3_LEPOC
Testis expressed 10.
    
 0.518
pes1
Pescadillo homolog; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome.
   
 0.513
gnl3
Guanine nucleotide binding protein-like 3 (nucleolar).
   
  0.424
W5NBU7_LEPOC
Guanine nucleotide binding protein-like 3 (nucleolar)-like.
   
  0.424
crebbp
CREB binding protein b.
    
 0.413
gnl2
Nucleolar GTP-binding protein 2; GTPase that associates with pre-60S ribosomal subunits in the nucleolus and is required for their nuclear export and maturation. Belongs to the TRAFAC class YlqF/YawG GTPase family. NOG2 subfamily.
   
 0.413
W5N0P4_LEPOC
E1A binding protein p300 a.
    
 0.413
W5N8W0_LEPOC
Uncharacterized protein.
    
 0.413
W5LW21_LEPOC
Centrosomal protein 152.
   
  0.410
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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