STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
bace2Beta-secretase 2; Belongs to the peptidase A1 family. (506 aa)    
Predicted Functional Partners:
W5MXT3_LEPOC
Amyloid beta (A4) precursor protein b.
    
 0.848
W5N1J9_LEPOC
Golgi-associated, gamma adaptin ear containing, ARF binding protein 1.
    
 0.842
W5MV57_LEPOC
Reticulon.
   
 0.670
W5NCG7_LEPOC
Reticulon.
   
 0.670
rtn4
Reticulon.
   
 0.670
W5NLF1_LEPOC
Uncharacterized protein.
   
 0.670
aplp2
Amyloid beta (A4) precursor-like protein 2.
    
 0.644
W5M8N9_LEPOC
Amyloid beta (A4) precursor-like protein 1.
    
 0.613
W5M1F3_LEPOC
Cathepsin F; Belongs to the peptidase C1 family.
   
 0.600
ctso
Cathepsin O; Belongs to the peptidase C1 family.
   
 0.600
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.