STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC102696289Zgc:113162. (332 aa)    
Predicted Functional Partners:
cfl2
Cofilin 2 (muscle); Belongs to the actin-binding proteins ADF family.
   
 0.870
LOC102683678
Cofilin 1 (non-muscle), like; Belongs to the actin-binding proteins ADF family.
   
 0.870
W5LYE8_LEPOC
Transmembrane 9 superfamily member; Belongs to the nonaspanin (TM9SF) (TC 9.A.2) family.
    
 0.861
bmpr2
Receptor protein serine/threonine kinase; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily.
    
0.784
traf7
TNF receptor-associated factor 7.
   
 0.751
TMEM189-UBE2V1
TMEM189-UBE2V1 readthrough.
    
 0.674
mib2
Mindbomb E3 ubiquitin protein ligase 2.
    
 0.669
itsn2
Intersectin 2b.
   
 0.660
ripk4
Receptor-interacting serine-threonine kinase 4.
    
0.610
W5MSM4_LEPOC
Protein kinase domain-containing protein.
    
 0.610
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.