Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
LOC102696289Zgc:113162. (332 aa)    
Predicted Functional Partners:
cfl2
Cofilin 2 (muscle); Belongs to the actin-binding proteins ADF family.
   
 0.797
LOC102683678
Cofilin 1 (non-muscle), like; Belongs to the actin-binding proteins ADF family.
   
 0.797
agpat2
1-acyl-sn-glycerol-3-phosphate acyltransferase; Belongs to the 1-acyl-sn-glycerol-3-phosphate acyltransferase family.
    
 0.595
gak
Cyclin G associated kinase.
    
 0.595
traf7
TNF receptor-associated factor 7.
   
 0.570
peli2
Pellino E3 ubiquitin protein ligase family member 2.
    
 0.568
peli1
Pellino E3 ubiquitin protein ligase 1b.
    
 0.568
mib2
Mindbomb E3 ubiquitin protein ligase 2.
    
 0.542
gpd1l
Glycerol-3-phosphate dehydrogenase [NAD(+)].
    
  0.535
LOC102690688
Glycerol-3-phosphate dehydrogenase [NAD(+)].
    
  0.535
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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