STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MLKLMixed lineage kinase domain like pseudokinase. (474 aa)    
Predicted Functional Partners:
pgam5
PGAM family member 5, serine/threonine protein phosphatase, mitochondrial.
    
 0.953
LOC102693534
Uncharacterized protein.
    
 0.931
hsp90aa1
Heat shock protein 90, alpha (cytosolic), class A member 1, tandem duplicate 1.
    
 0.931
hsp90ab1
Heat shock protein 90, alpha (cytosolic), class B member 1.
    
 0.931
vps4a
Vacuolar protein sorting 4 homolog A; Belongs to the AAA ATPase family.
    
  0.908
vps4b
Vacuolar protein sorting 4 homolog B; Belongs to the AAA ATPase family.
    
  0.908
chmp4b
Charged multivesicular body protein 4Ba.
    
 0.903
chmp4c
Charged multivesicular body protein 4C.
    
 0.903
chmp1a
Charged multivesicular body protein 1A.
     
  0.900
chmp2b
Charged multivesicular body protein 2Bb.
     
  0.900
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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