STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LDLRAD3Low density lipoprotein receptor class A domain containing 3. (324 aa)    
Predicted Functional Partners:
itsn2
Intersectin 2b.
    
 0.746
mst1r
Macrophage stimulating 1 receptor b.
    
  0.717
met
MET proto-oncogene, receptor tyrosine kinase.
    
  0.717
itsn1
Intersectin 1 (SH3 domain protein).
    
 0.698
RELN
Reelin.
    
 0.634
lrpap1
Low density lipoprotein receptor-related protein associated protein 1.
    
 0.610
W5N2B9_LEPOC
Corin, serine peptidase.
    
0.602
LOC107075384
Uncharacterized protein.
    
 0.576
pcsk9
Proprotein convertase subtilisin/kexin type 9; Belongs to the peptidase S8 family.
    
 0.569
sacm1l
SAC1 like phosphatidylinositide phosphatase a.
    
 0.558
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.