Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
W5LZX9_LEPOCUncharacterized protein. (124 aa)    
Predicted Functional Partners:
W5M204_LEPOC
Uncharacterized protein.
 
      0.850
ints1
Integrator complex subunit 1.
    
 0.577
W5M2E8_LEPOC
Integrator complex subunit 11.
    
 0.571
ints9
Integrator complex subunit 9.
    
 0.571
ints4
Integrator complex subunit 4.
    
 0.553
W5MJ27_LEPOC
Integrator complex subunit 3.
    
 0.552
ints13
Integrator complex subunit 13.
    
 0.552
ints7
Integrator complex subunit 7.
    
 0.552
ints10
Integrator complex subunit 10.
    
 0.539
W5NJ40_LEPOC
Epoxide hydrolase 2, cytoplasmic.
    
 0.471
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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