Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
prickle1Prickle homolog 1a. (873 aa)    
Predicted Functional Partners:
vangl1
Vang-like protein.
    
 0.997
W5NAR9_LEPOC
Dishevelled segment polarity protein 2.
    
 0.994
W5M4V5_LEPOC
Dishevelled segment polarity protein 1a.
    
 0.990
W5MP85_LEPOC
Dishevelled segment polarity protein 3a.
    
 0.989
prickle2
Prickle homolog 2b.
     
 
0.900
tbx1
T-box transcription factor 1.
      
 0.880
W5NJY5_LEPOC
Ankyrin repeat domain 6b.
    
 0.876
W5MTD3_LEPOC
Frizzled class receptor 6; Belongs to the G-protein coupled receptor Fz/Smo family.
  
 
 0.813
W5NGN3_LEPOC
Cadherin EGF LAG seven-pass G-type receptor 1a; Belongs to the G-protein coupled receptor 2 family.
   
 0.767
W5MDT9_LEPOC
Inversin.
    
 0.757
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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