LOC102683012 protein (Lepisosteus oculatus) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

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a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

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co-expression

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[Homology]

Score

LOC102683012

Uncharacterized protein. (223 aa)

Predicted Functional Partners:

itsn2

0.637

tsc2

0.566

mst1r

0.548

met

0.548

W5N7F7_LEPOC

0.541

itsn1

0.540

myo9b

0.524

myo9a

0.524

W5NJB2_LEPOC

0.497

SHANK3

0.497

Your Current Organism:

Lepisosteus oculatus

NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar

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structured XML interaction data, according to the 'PSI-MI' data standard

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC102683012	SHANK3	ENSLOCP00000001702	ENSLOCP00000020722	Uncharacterized protein.	SH3 and multiple ankyrin repeat domains 3a.	0.497
LOC102683012	W5N7F7_LEPOC	ENSLOCP00000001702	ENSLOCP00000016566	Uncharacterized protein.	Regulatory associated protein of MTOR, complex 1.	0.541
LOC102683012	W5NJB2_LEPOC	ENSLOCP00000001702	ENSLOCP00000020721	Uncharacterized protein.	Uncharacterized protein.	0.497
LOC102683012	itsn1	ENSLOCP00000001702	ENSLOCP00000008086	Uncharacterized protein.	Intersectin 1 (SH3 domain protein).	0.540
LOC102683012	itsn2	ENSLOCP00000001702	ENSLOCP00000001168	Uncharacterized protein.	Intersectin 2b.	0.637
LOC102683012	met	ENSLOCP00000001702	ENSLOCP00000019200	Uncharacterized protein.	MET proto-oncogene, receptor tyrosine kinase.	0.548
LOC102683012	mst1r	ENSLOCP00000001702	ENSLOCP00000013339	Uncharacterized protein.	Macrophage stimulating 1 receptor b.	0.548
LOC102683012	myo9a	ENSLOCP00000001702	ENSLOCP00000018447	Uncharacterized protein.	Myosin IXAa; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.	0.524
LOC102683012	myo9b	ENSLOCP00000001702	ENSLOCP00000004932	Uncharacterized protein.	Myosin IXb; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.	0.524
LOC102683012	tsc2	ENSLOCP00000001702	ENSLOCP00000003605	Uncharacterized protein.	TSC complex subunit 2.	0.566
SHANK3	LOC102683012	ENSLOCP00000020722	ENSLOCP00000001702	SH3 and multiple ankyrin repeat domains 3a.	Uncharacterized protein.	0.497
SHANK3	W5NJB2_LEPOC	ENSLOCP00000020722	ENSLOCP00000020721	SH3 and multiple ankyrin repeat domains 3a.	Uncharacterized protein.	0.938
W5N7F7_LEPOC	LOC102683012	ENSLOCP00000016566	ENSLOCP00000001702	Regulatory associated protein of MTOR, complex 1.	Uncharacterized protein.	0.541
W5N7F7_LEPOC	tsc2	ENSLOCP00000016566	ENSLOCP00000003605	Regulatory associated protein of MTOR, complex 1.	TSC complex subunit 2.	0.938
W5NJB2_LEPOC	LOC102683012	ENSLOCP00000020721	ENSLOCP00000001702	Uncharacterized protein.	Uncharacterized protein.	0.497
W5NJB2_LEPOC	SHANK3	ENSLOCP00000020721	ENSLOCP00000020722	Uncharacterized protein.	SH3 and multiple ankyrin repeat domains 3a.	0.938
itsn1	LOC102683012	ENSLOCP00000008086	ENSLOCP00000001702	Intersectin 1 (SH3 domain protein).	Uncharacterized protein.	0.540
itsn1	itsn2	ENSLOCP00000008086	ENSLOCP00000001168	Intersectin 1 (SH3 domain protein).	Intersectin 2b.	0.820
itsn2	LOC102683012	ENSLOCP00000001168	ENSLOCP00000001702	Intersectin 2b.	Uncharacterized protein.	0.637
itsn2	itsn1	ENSLOCP00000001168	ENSLOCP00000008086	Intersectin 2b.	Intersectin 1 (SH3 domain protein).	0.820