Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
W5M015_LEPOCTestis specific, 10; Belongs to the cullin family. (811 aa)    
Predicted Functional Partners:
itsn2
Intersectin 2b.
    
 0.975
itsn1
Intersectin 1 (SH3 domain protein).
    
 0.942
W5MXV0_LEPOC
Centromere protein J.
   
 0.914
W5NFG0_LEPOC
Tcp10_C domain-containing protein.
   
 0.914
tbc1d31
TBC1 domain family, member 31.
   
 0.893
plk4
Polo-like kinase 4 (Drosophila).
   
 0.861
wrap73
WD repeat containing, antisense to TP73.
    
 
 0.859
cep290
Centrosomal protein 290.
   
 0.806
gak
Cyclin G associated kinase.
   
 0.799
CCP110
Centriolar coiled-coil protein 110.
   
 0.795
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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