Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC102685565BTB domain-containing protein. (613 aa)    
Predicted Functional Partners:
LOC102689289
Kelch-like ECH-associated protein 1a.
  
  
 
0.916
W5MCQ1_LEPOC
Rho related BTB domain containing 4.
    
  0.911
rhobtb1
Rho related BTB domain containing 1.
    
  0.911
W5MYV2_LEPOC
BTB domain-containing protein.
  
  
 
0.911
rhobtb2
Rho related BTB domain containing 2a.
    
  0.911
W5MYL5_LEPOC
Si:rp71-68n21.9.
  
  
 
0.909
klhl13
Kelch-like family member 13.
  
  
 
0.907
ubxn7
UBX domain protein 7.
    
  0.549
bbs9
Bardet-Biedl syndrome 9.
    
 0.541
W5MWM9_LEPOC
Tetratricopeptide repeat domain 8.
    
 0.517
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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