STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ankrd29Ankyrin repeat domain 29. (298 aa)    
Predicted Functional Partners:
ppp6c
Serine/threonine-protein phosphatase.
   
 0.691
spaca9
Sperm acrosome associated 9.
    
 
 0.606
W5NA12_LEPOC
Nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, beta.
  
 
 
0.596
ppp6r3
Protein phosphatase 6, regulatory subunit 3.
    
 0.588
ppp6r2
Protein phosphatase 6, regulatory subunit 2a.
    
 0.588
npc1
Niemann-Pick disease, type C1.
 
  
 
 0.584
rps3
Ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family.
    
 0.577
relb
V-rel avian reticuloendotheliosis viral oncogene homolog B.
   
 0.576
W5NGW5_LEPOC
V-rel avian reticuloendotheliosis viral oncogene homolog.
   
 0.576
W5M0Q3_LEPOC
Uncharacterized protein.
    
 
 0.571
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.