Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
W5M035_LEPOCTranslocated promoter region b, nuclear basket protein. (2366 aa)    
Predicted Functional Partners:
W5MNS7_LEPOC
Nucleoporin 153.
   
 0.999
nup93
Nuclear pore complex protein Nup93; Plays a role in the nuclear pore complex (NPC) assembly and/or maintenance; Belongs to the nucleoporin interacting component (NIC) family.
   
 0.996
seh1l
SEH1-like (S. cerevisiae); Belongs to the WD repeat SEC13 family.
    
 0.996
nup85
Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC).
   
 0.996
rae1
Ribonucleic acid export 1.
    
 0.995
RANBP2
RAN binding protein 2.
   
 0.995
W5N4Q5_LEPOC
Nucleoporin 155.
   
 0.994
nup205
Nucleoporin 205.
   
 0.990
W5NH37_LEPOC
Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).
    
 0.988
W5LZ72_LEPOC
Zgc:153681.
    
 0.984
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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