Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
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[Homology]
Score
syt12Synaptotagmin XII. (425 aa)    
Predicted Functional Partners:
STON2
Stonin-2; Adapter protein involved in endocytic machinery. Involved in the synaptic vesicle recycling. May facilitate clathrin-coated vesicle uncoating; Belongs to the Stoned B family.
    
 0.731
snap25
Synaptosomal-associated protein; Belongs to the SNAP-25 family.
   
 0.716
W5M3Z5_LEPOC
Vesicle-associated membrane protein 3 (cellubrevin).
    
 0.706
W5LZX4_LEPOC
t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family.
    
 0.646
stx4
Syntaxin 4; Belongs to the syntaxin family.
    
 0.646
stx1b
Syntaxin 1B; Belongs to the syntaxin family.
    
 0.646
stx2
Syntaxin 2b; Belongs to the syntaxin family.
    
 0.646
W5N984_LEPOC
Synapsin IIa.
    
 0.645
syn1
Synapsin I.
    
 0.645
syn3
Uncharacterized protein.
    
 0.645
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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