Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PACS1Phosphofurin acidic cluster sorting protein 1. (869 aa)    
Predicted Functional Partners:
wdr37
WD repeat domain 37.
    
 
 0.965
FGFR1OP
FGFR1 oncogene partner.
    
   0.901
W5N730_LEPOC
Golgi associated, gamma adaptin ear containing, ARF binding protein 3a.
    
 
 0.729
snx24
Sorting nexin 24.
    
   0.637
tmem33
Transmembrane protein 33.
      
 0.520
mrpl38
Mitochondrial ribosomal protein L38.
      
 0.517
gmppa
GDP-mannose pyrophosphorylase Aa.
      
 0.510
fas
Uncharacterized protein.
      
 0.510
GGA2
Golgi associated, gamma adaptin ear containing, ARF binding protein 2.
    
 
 0.499
bcap31
B cell receptor associated protein 31.
      
 0.467
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
Server load: low (8%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.