STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
W5M047_LEPOCHexosyltransferase. (292 aa)    
Predicted Functional Partners:
FUT4
Fucosyltransferase 4.
     
 0.829
LOC102696232
UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 3.
   
 
 0.828
W5M3Z1_LEPOC
UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 2.
   
 
 0.828
b4galt4
UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 4.
   
 
 0.828
LOC102682343
Si:dkey-199f5.8.
   
 
 0.707
B4GALT1
Beta-1,4-galactosyltransferase 1.
   
 
 0.530
W5N0C5_LEPOC
Uncharacterized protein.
   
 
 0.530
FUT9
Fucosyltransferase 9.
     
 0.512
W5NMU7_LEPOC
Glyco_tran_10_N domain-containing protein.
     
 0.495
LOC102691696
Glyco_tran_10_N domain-containing protein.
     
 0.495
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.