Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
glg1Golgi glycoprotein 1b. (1146 aa)    
Predicted Functional Partners:
SELE
Selectin P.
    
 0.922
osbpl5
Oxysterol-binding protein; Belongs to the OSBP family.
    
   0.842
OSBPL8
Oxysterol-binding protein; Belongs to the OSBP family.
    
   0.842
aplp2
Amyloid beta (A4) precursor-like protein 2.
   
  
 0.796
fadd
Fas associated via death domain.
      
 0.787
tm9sf4
Transmembrane 9 superfamily member; Belongs to the nonaspanin (TM9SF) (TC 9.A.2) family.
   
  
 0.742
nfkbia
Nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha b.
    
   0.732
rnaset2
Ribonuclease T2; Belongs to the RNase T2 family.
      
 0.732
plbd2
Phospholipase B-like; Putative phospholipase.
      
 0.724
clg10h17orf75
Zgc:153240.
      
 0.724
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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