Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
lypd6LY6/PLAUR domain containing 6. (173 aa)    
Predicted Functional Partners:
W5M046_LEPOC
LY6/PLAUR domain containing 6B.
  
 
 
0.916
LOC102694648
Transient receptor potential cation channel, subfamily V, member 6; Belongs to the transient receptor (TC 1.A.4) family.
      
 0.818
W5N6Z3_LEPOC
Cytochrome P450, family 19, subfamily A, polypeptide 1a; Belongs to the cytochrome P450 family.
      
 0.743
W5MU46_LEPOC
Uncharacterized protein.
    
 
 0.721
LOC107076598
Uncharacterized protein.
    
 0.707
LOC102693289
Si:ch73-380n15.2.
    
 0.704
W5NBC6_LEPOC
Cholinergic receptor, nicotinic, alpha 7 (neuronal).
    
 0.704
chrna4
Cholinergic receptor, nicotinic, alpha 4b.
    
 0.701
chrna2
Cholinergic receptor, nicotinic, alpha 2a (neuronal).
    
 0.701
lrrc34
Leucine rich repeat containing 34.
      
 0.696
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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