COL16A1 protein (Lepisosteus oculatus) - STRING interaction network

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Score

COL16A1

Collagen type XVI alpha 1 chain. (1591 aa)

Predicted Functional Partners:

ak9

0.643

W5M0Z8_LEPOC

0.432

col6a1

0.432

W5MDK5_LEPOC

0.428

LOC102699233

0.415

col6a2

0.404

W5NCX0_LEPOC

0.402

W5MSP5_LEPOC

0.401

W5MXD5_LEPOC

0.401

Your Current Organism:

Lepisosteus oculatus

NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
COL16A1	LOC102699233	ENSLOCP00000001774	ENSLOCP00000021845	Collagen type XVI alpha 1 chain.	Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.	0.415
COL16A1	W5M0Z8_LEPOC	ENSLOCP00000001774	ENSLOCP00000002055	Collagen type XVI alpha 1 chain.	Uncharacterized protein.	0.432
COL16A1	W5MDK5_LEPOC	ENSLOCP00000001774	ENSLOCP00000006464	Collagen type XVI alpha 1 chain.	Fibrillar collagen NC1 domain-containing protein.	0.428
COL16A1	W5MSP5_LEPOC	ENSLOCP00000001774	ENSLOCP00000011404	Collagen type XVI alpha 1 chain.	FZ domain-containing protein.	0.401
COL16A1	W5MXD5_LEPOC	ENSLOCP00000001774	ENSLOCP00000013044	Collagen type XVI alpha 1 chain.	Collagen, type XV, alpha 1b.	0.401
COL16A1	W5NCX0_LEPOC	ENSLOCP00000001774	ENSLOCP00000018479	Collagen type XVI alpha 1 chain.	Tetratricopeptide repeat domain 41.	0.402
COL16A1	ak9	ENSLOCP00000001774	ENSLOCP00000021203	Collagen type XVI alpha 1 chain.	Adenylate kinase 9.	0.643
COL16A1	col6a1	ENSLOCP00000001774	ENSLOCP00000011817	Collagen type XVI alpha 1 chain.	Collagen, type VI, alpha 1.	0.432
COL16A1	col6a2	ENSLOCP00000001774	ENSLOCP00000011851	Collagen type XVI alpha 1 chain.	Collagen type VI alpha 2 chain.	0.404
LOC102699233	COL16A1	ENSLOCP00000021845	ENSLOCP00000001774	Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.	Collagen type XVI alpha 1 chain.	0.415
LOC102699233	W5M0Z8_LEPOC	ENSLOCP00000021845	ENSLOCP00000002055	Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.	Uncharacterized protein.	0.415
LOC102699233	W5MDK5_LEPOC	ENSLOCP00000021845	ENSLOCP00000006464	Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.	Fibrillar collagen NC1 domain-containing protein.	0.415
LOC102699233	col6a1	ENSLOCP00000021845	ENSLOCP00000011817	Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.	Collagen, type VI, alpha 1.	0.415
LOC102699233	col6a2	ENSLOCP00000021845	ENSLOCP00000011851	Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.	Collagen type VI alpha 2 chain.	0.415
W5M0Z8_LEPOC	COL16A1	ENSLOCP00000002055	ENSLOCP00000001774	Uncharacterized protein.	Collagen type XVI alpha 1 chain.	0.432
W5M0Z8_LEPOC	LOC102699233	ENSLOCP00000002055	ENSLOCP00000021845	Uncharacterized protein.	Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.	0.415
W5M0Z8_LEPOC	W5MDK5_LEPOC	ENSLOCP00000002055	ENSLOCP00000006464	Uncharacterized protein.	Fibrillar collagen NC1 domain-containing protein.	0.527
W5M0Z8_LEPOC	W5MSP5_LEPOC	ENSLOCP00000002055	ENSLOCP00000011404	Uncharacterized protein.	FZ domain-containing protein.	0.412
W5M0Z8_LEPOC	W5MXD5_LEPOC	ENSLOCP00000002055	ENSLOCP00000013044	Uncharacterized protein.	Collagen, type XV, alpha 1b.	0.412
W5M0Z8_LEPOC	W5NCX0_LEPOC	ENSLOCP00000002055	ENSLOCP00000018479	Uncharacterized protein.	Tetratricopeptide repeat domain 41.	0.402