Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
W5M071_LEPOCHomeobox protein cut-like. (1479 aa)    
Predicted Functional Partners:
gosr1
Golgi SNAP receptor complex member 1; Involved in transport from the ER to the Golgi apparatus as well as in intra-Golgi transport. It belongs to a super-family of proteins called t-SNAREs or soluble NSF (N-ethylmaleimide-sensitive factor) attachment protein receptor.
    
 0.765
ZNF451
Zinc finger protein 451.
    
 
 0.709
W5M8W0_LEPOC
DNA-binding protein SATB.
    
 
 0.680
W5MHM9_LEPOC
DNA-binding protein SATB.
    
 
 0.680
wdr53
WD repeat domain 53.
      
 0.671
RELN
Reelin.
      
 0.644
eomes
Eomesodermin homolog b.
    
 
 0.627
tbr1
T-box brain transcription factor 1a.
    
 
 0.627
sox15
SRY-box transcription factor 19a.
    
 
 0.623
sox2
SRY-box transcription factor 2.
    
 
 0.623
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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