Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
W5M075_LEPOCIon_trans domain-containing protein. (374 aa)    
Predicted Functional Partners:
CATSPERB
Cation channel sperm associated auxiliary subunit beta.
    
 0.999
W5NA84_LEPOC
Ion_trans domain-containing protein.
  
 
0.998
W5M5P7_LEPOC
Uncharacterized protein.
    
 0.995
CATSPER3
Cation channel sperm associated 3.
  
 
0.995
W5NAF3_LEPOC
Uncharacterized protein.
    
 0.988
W5ME77_LEPOC
Ion_trans domain-containing protein.
  
 
0.978
CATSPERE
Catsper channel auxiliary subunit epsilon.
    
 0.957
EFCAB9
EF-hand calcium binding domain 9.
    
 
 0.934
ift80
Uncharacterized protein.
      
 0.849
cacna1h
Calcium channel, voltage-dependent, T type, alpha 1H subunit b.
    
0.832
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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