Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
W5M081_LEPOCCell adhesion molecule 3. (442 aa)    
Predicted Functional Partners:
W5M9T0_LEPOC
Cell adhesion molecule 4.
    
  0.767
W5MBA3_LEPOC
Cell adhesion molecule 1b.
     
  0.658
W5MF83_LEPOC
Uncharacterized protein.
    
  0.645
W5MFA5_LEPOC
Nectin cell adhesion molecule 1b.
    
  0.645
W5MJ54_LEPOC
Uncharacterized protein.
    
  0.620
W5MJ69_LEPOC
Uncharacterized protein.
    
  0.620
W5MSR5_LEPOC
Nectin cell adhesion molecule 3b.
    
  0.620
W5NJJ6_LEPOC
Microtubule associated monooxygenase, calponin and LIM domain containing 3a.
      
 0.587
ntng1
Vav 3 guanine nucleotide exchange factor b.
    
 0.413
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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