Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC102689088Uncharacterized protein. (431 aa)    
Predicted Functional Partners:
W5LWW8_LEPOC
Thioredoxin domain containing 11.
    
  0.907
edem2
alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family.
    
   0.782
W5M0X2_LEPOC
alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family.
    
   0.555
edem3
alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family.
    
   0.555
mysm1
Myb-like, SWIRM and MPN domains 1.
    
  0.491
W5MSQ6_LEPOC
AT rich interactive domain 4A (RBP1-like).
    
 0.488
W5NG20_LEPOC
Translocase of outer mitochondrial membrane 20.
    
 0.488
W5LYH0_LEPOC
Tsukushi small leucine rich proteoglycan homolog (Xenopus laevis).
    
 0.451
RANBP2
RAN binding protein 2.
    
 0.434
mib2
Mindbomb E3 ubiquitin protein ligase 2.
   
  0.425
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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