Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
mctp1Multiple C2 domains, transmembrane 1b. (872 aa)    
Predicted Functional Partners:
itsn2
Intersectin 2b.
     
 0.689
W5MTG8_LEPOC
Nucleotide binding protein-like.
      
 0.610
W5MG12_LEPOC
Si:ch211-259g3.4.
      
 0.603
nub1
Negative regulator of ubiquitin-like proteins 1.
      
 0.559
pcolce2
Procollagen C-endopeptidase enhancer 2a.
      
 0.524
FAM81A
Family with sequence similarity 81 member A.
      
 0.524
frmpd1
FERM and PDZ domain containing 1b.
      
 0.517
tmem51
Transmembrane protein 51b.
      
 0.517
rasa1
RAS p21 protein activator (GTPase activating protein) 1b.
      
 0.513
cmc2
COX assembly mitochondrial protein.
      
 0.510
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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