Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
rnd3Rho family GTPase 3b. (243 aa)    
Predicted Functional Partners:
itsn2
Intersectin 2b.
    
 0.918
ect2
Epithelial cell transforming 2.
    
 0.907
W5M1U6_LEPOC
Rho-associated, coiled-coil containing protein kinase 1; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family.
    
 0.853
W5NIY2_LEPOC
Rho-associated, coiled-coil containing protein kinase 2b; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family.
    
 0.853
arhgdig
Rho GDP dissociation inhibitor (GDI) gamma.
   
 0.848
arhgdia
Rho GDP dissociation inhibitor (GDI) alpha.
   
 0.848
itsn1
Intersectin 1 (SH3 domain protein).
    
 0.840
arhgap5
Rho GTPase activating protein 5.
    
 0.803
arhgap35
Rho GTPase activating protein 35b.
    
 0.803
W5N857_LEPOC
Plexin b1a.
    
 0.790
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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