Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ADAMTS20ADAM metallopeptidase with thrombospondin type 1 motif 20. (1912 aa)    
Predicted Functional Partners:
LOC102687524
Somatolactin alpha.
      
 0.673
myo7a
Myosin VIIAa; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
      
 0.622
W5LYP2_LEPOC
ADAM metallopeptidase with thrombospondin type 1 motif, 10.
    
 0.536
adamts6
ADAM metallopeptidase with thrombospondin type 1 motif, 6.
    
 0.536
usf2
Upstream transcription factor 2, c-fos interacting.
    
 
 0.535
adamts14
ADAM metallopeptidase with thrombospondin type 1 motif, 14.
  
 
0.504
W5LWF4_LEPOC
Beta 3-glucosyltransferase a.
    
 0.466
pofut2
Protein O-fucosyltransferase 2.
     
 0.459
W5N420_LEPOC
Thrombospondin 1b.
    
 0.442
thbs2
Thrombospondin 2a.
    
 0.441
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.