Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
FOXJ3Forkhead box J3. (655 aa)    
Predicted Functional Partners:
myb
V-myb avian myeloblastosis viral oncogene homolog.
    
 0.919
W5MNE3_LEPOC
Activation-induced cytidine deaminase.
      
 0.897
LOC102694648
Transient receptor potential cation channel, subfamily V, member 6; Belongs to the transient receptor (TC 1.A.4) family.
      
 0.847
nmd3
60S ribosomal export protein NMD3; Acts as an adapter for the XPO1/CRM1-mediated export of the 60S ribosomal subunit; Belongs to the NMD3 family.
      
 0.806
flot2
Flotillin; Belongs to the band 7/mec-2 family. Flotillin subfamily.
      
 0.765
golim4
Uncharacterized protein.
      
 0.757
pax6
Paired box 6a.
    
 0.726
W5NER2_LEPOC
Paired box 4.
    
 0.726
sox6
SRY-box transcription factor 6.
    
 
 0.699
emc6
ER membrane protein complex subunit 6.
      
 0.691
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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