STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DNAAF5Dynein axonemal assembly factor 5. (848 aa)    
Predicted Functional Partners:
W5NA59_LEPOC
Radial spoke head component 4A.
    
 
 0.652
W5M6A4_LEPOC
Exportin 6.
    
 
 0.621
dnai2
Dynein, axonemal, intermediate chain 2b.
    
 
 0.607
spag1
Sperm associated antigen 1a.
      
 0.584
zmynd10
Zinc finger MYND domain-containing protein 10; Plays a role in axonemal structure organization and motility. Involved in axonemal pre-assembly of inner and outer dynein arms (IDA and ODA, respectively) for proper axoneme building for cilia motility. May act by indirectly regulating transcription of dynein proteins. Belongs to the ZMYND10 family.
      
 0.580
cfap300
Cilia and flagella associated protein 300.
    
 
 0.566
cfap298
Cilia and flagella associated protein 298.
      
 0.552
dnali1
Dynein, axonemal, light intermediate chain 1.
      
 0.548
W5N4S6_LEPOC
Leucine rich repeat containing 6.
      
 0.548
rsph9
Radial spoke head 9 homolog.
      
 0.547
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.