STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
W5M0E8_LEPOCPR domain containing 2, with ZNF domain b. (1629 aa)    
Predicted Functional Partners:
LOC107075724-2
C-type lectin domain-containing protein.
    
 0.915
LOC102698683
SET domain and mariner transposase fusion gene.
    
 0.894
W5NAU2_LEPOC
Histone-lysine N-methyltransferase; Belongs to the class V-like SAM-binding methyltransferase superfamily. Histone-lysine methyltransferase family. Suvar3-9 subfamily.
    
 0.879
smyd3
SET and MYND domain containing 3.
    
 0.879
camkmt
Calmodulin-lysine N-methyltransferase.
     
 0.871
W5NEJ9_LEPOC
Lysine (K)-specific methyltransferase 2E.
   
 
 0.863
smyd2
SET and MYND domain containing 2a.
    
 0.859
W5LZ26_LEPOC
SET and MYND domain containing 1b.
    
 0.849
W5N399_LEPOC
Uncharacterized protein.
   
 0.779
W5N3A3_LEPOC
Uncharacterized protein.
   
 0.779
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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