Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
bicdl1BICD family like cargo adaptor 1. (592 aa)    
Predicted Functional Partners:
bicdl2
BICD family like cargo adaptor 2.
     
0.905
W5M9Q0_LEPOC
HAP1 N-terminal domain-containing protein.
     
0.902
HOOK3
Hook microtubule tethering protein 3.
    
 
 0.703
rnf10
Ring finger protein 10.
      
 0.679
W5M9H6_LEPOC
Coiled-coil domain containing 125.
      
 0.676
W5NNC8_LEPOC
Coiled-coil domain containing 96.
    
 0.676
ACTR1A
Actin related protein 1A.
    
 
 0.655
LOC102689968
Actin related protein 1, centractin.
    
 
 0.655
hook2
Hook microtubule-tethering protein 2.
    
 
 0.643
ccdc149
Coiled-coil domain containing 149b.
      
 0.628
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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