Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
unc50Unc-50 homolog (C. elegans). (261 aa)    
Predicted Functional Partners:
RIC3
RIC3 acetylcholine receptor chaperone.
      
 0.767
arfrp1
ADP-ribosylation factor related protein 1.
    
 
 0.735
gbf1
Golgi brefeldin A resistant guanine nucleotide exchange factor 1.
    
 
 0.723
tmx3
Thioredoxin related transmembrane protein 3a.
      
 0.717
tmem41a
Transmembrane protein 41ab.
   
  
 0.689
rab6a
RAB6A, member RAS oncogene family.
    
 
 0.688
rab41
RAB41, member RAS oncogene family.
    
 
 0.688
ARHGAP6
Rho GTPase activating protein 6.
      
 0.676
akap17a
A kinase (PRKA) anchor protein 17A.
      
 0.675
W5MA65_LEPOC
Phosphatidylinositol glycan anchor biosynthesis, class O.
      
 0.660
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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