Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
mipepSi:ch73-1a9.4. (757 aa)    
Predicted Functional Partners:
RIMS2
Regulating synaptic membrane exocytosis 2.
    
   0.906
mgme1
Mitochondrial genome maintenance exonuclease 1; Metal-dependent single-stranded DNA (ssDNA) exonuclease involved in mitochondrial genome maintenance. Has preference for 5'-3' exonuclease activity. Necessary for maintenance of proper 7S DNA levels. Probably involved in mitochondrial DNA (mtDNA) repair. Belongs to the MGME1 family.
    
   0.870
GET1
Guided entry of tail-anchored proteins factor 1.
      
 0.746
WDR1
WD repeat domain 1.
    
   0.737
W5NH94_LEPOC
HBS1-like translational GTPase.
      
 0.706
W5M0G1_LEPOC
Uncharacterized protein.
   
  
 0.705
sdhaf4
Succinate dehydrogenase complex assembly factor 4.
    
 
 0.701
pitrm1
Pitrilysin metallopeptidase 1.
   
 
 0.699
atp23
Mitochondrial inner membrane protease ATP23; Belongs to the peptidase M76 family.
      
 0.678
magi3
Membrane associated guanylate kinase, WW and PDZ domain containing 3b.
     
 0.677
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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