Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
rmc1Regulator of MON1-CCZ1. (655 aa)    
Predicted Functional Partners:
mon1a
MON1 secretory trafficking family member A.
    
 0.990
mon1b
MON1 secretory trafficking family member Bb.
    
 0.990
ccz1
CCZ1 homolog, vacuolar protein trafficking and biogenesis associated.
    
 0.979
W5NB61_LEPOC
GRIP1 associated protein 1.
    
 
 0.873
W5N8F2_LEPOC
Sp6 transcription factor.
    
   0.748
rab7a
RAB7A, member RAS oncogene family.
    
 
 0.728
LOC102697663
Zgc:100918.
    
 
 0.728
rmi1
RMI1, RecQ mediated genome instability 1, homolog (S. cerevisiae).
      
 0.723
dars1
Aspartyl-tRNA synthetase.
    
   0.706
clg2h5orf51
Si:dkey-46a10.3.
      
 0.690
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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