Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
W5M0J6_LEPOCUncharacterized protein. (148 aa)    
Predicted Functional Partners:
W5M0K4_LEPOC
Uncharacterized protein.
 
     0.923
abcf3
ATP-binding cassette, sub-family F (GCN20), member 3.
   
 
 0.903
drg2
Developmentally regulated GTP binding protein 2.
   
 
 0.871
rwdd1
RWD domain containing 1.
    
 
 0.869
eef1g
Eukaryotic translation elongation factor 1 gamma.
   
 
 0.840
W5M9U4_LEPOC
Ribosomal protein S19.
    
 
 0.826
W5N4K6_LEPOC
Uncharacterized protein.
   
 
 0.793
W5N4L0_LEPOC
Uncharacterized protein.
   
 
 0.793
cdc5l
CDC5 cell division cycle 5-like (S. pombe).
    
   0.786
W5M2I5_LEPOC
Ribosomal protein S15; Belongs to the universal ribosomal protein uS19 family.
   
 
 0.783
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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