STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TNFRSF19TNF receptor superfamily member 19. (374 aa)    
Predicted Functional Partners:
eda
Ectodysplasin A; Belongs to the tumor necrosis factor family.
     
 0.794
traf2
TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.
    
  0.513
W5LYQ5_LEPOC
TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.
    
  0.513
W5LZE6_LEPOC
Uncharacterized protein.
    
  0.513
pdzrn4
PDZ domain containing ring finger 4.
    
  0.513
LOC102695888
TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.
    
  0.513
rnf41
Ring finger protein 41.
    
  0.513
traf7
TNF receptor-associated factor 7.
    
  0.513
traf4
TNF receptor-associated factor.
    
  0.513
traf1
TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.
    
  0.513
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.