W5M0J9_LEPOC protein (Lepisosteus oculatus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

W5M0J9_LEPOC

Voltage-dependent N-type calcium channel subunit alpha; Voltage-sensitive calcium channels (VSCC) mediate the entry of calcium ions into excitable cells and are also involved in a variety of calcium-dependent processes, including muscle contraction, hormone or neurotransmitter release, gene expression, cell motility, cell division and cell death. The isoform alpha-1B gives rise to N-type calcium currents. (2356 aa)

Predicted Functional Partners:

CACNA2D2

0.983

cacnb4

0.974

cacnb1

0.974

W5MKU2_LEPOC

0.964

cacnb2

0.964

cacna2d3

0.964

W5NIU3_LEPOC

0.964

W5N9W6_LEPOC

0.947

W5N0U1_LEPOC

0.946

W5NIS7_LEPOC

0.946

Your Current Organism:

Lepisosteus oculatus

NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc.

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CACNA2D2	W5M0J9_LEPOC	ENSLOCP00000017559	ENSLOCP00000001906	Calcium voltage-gated channel auxiliary subunit alpha2delta 2.	Voltage-dependent N-type calcium channel subunit alpha; Voltage-sensitive calcium channels (VSCC) mediate the entry of calcium ions into excitable cells and are also involved in a variety of calcium-dependent processes, including muscle contraction, hormone or neurotransmitter release, gene expression, cell motility, cell division and cell death. The isoform alpha-1B gives rise to N-type calcium currents.	0.983
CACNA2D2	W5MKU2_LEPOC	ENSLOCP00000017559	ENSLOCP00000009001	Calcium voltage-gated channel auxiliary subunit alpha2delta 2.	Calcium channel, voltage-dependent, beta 3a.	0.989
CACNA2D2	W5N0U1_LEPOC	ENSLOCP00000017559	ENSLOCP00000014250	Calcium voltage-gated channel auxiliary subunit alpha2delta 2.	Voltage-dependent L-type calcium channel subunit alpha; Voltage-sensitive calcium channels (VSCC) mediate the entry of calcium ions into excitable cells and are also involved in a variety of calcium-dependent processes, including muscle contraction, hormone or neurotransmitter release, gene expression, cell motility, cell division and cell death; Belongs to the calcium channel alpha-1 subunit (TC 1.A.1.11) family.	0.992
CACNA2D2	W5N9W6_LEPOC	ENSLOCP00000017559	ENSLOCP00000017425	Calcium voltage-gated channel auxiliary subunit alpha2delta 2.	Voltage-dependent L-type calcium channel subunit alpha; Voltage-sensitive calcium channels (VSCC) mediate the entry of calcium ions into excitable cells and are also involved in a variety of calcium-dependent processes, including muscle contraction, hormone or neurotransmitter release, gene expression, cell motility, cell division and cell death; Belongs to the calcium channel alpha-1 subunit (TC 1.A.1.11) family.	0.992
CACNA2D2	W5NIS7_LEPOC	ENSLOCP00000017559	ENSLOCP00000020536	Calcium voltage-gated channel auxiliary subunit alpha2delta 2.	Voltage-dependent L-type calcium channel subunit alpha; Voltage-sensitive calcium channels (VSCC) mediate the entry of calcium ions into excitable cells and are also involved in a variety of calcium-dependent processes, including muscle contraction, hormone or neurotransmitter release, gene expression, cell motility, cell division and cell death; Belongs to the calcium channel alpha-1 subunit (TC 1.A.1.11) family.	0.992
CACNA2D2	W5NIU3_LEPOC	ENSLOCP00000017559	ENSLOCP00000020552	Calcium voltage-gated channel auxiliary subunit alpha2delta 2.	Calcium channel, voltage-dependent, alpha 2/delta subunit 4a.	0.925
CACNA2D2	cacna2d3	ENSLOCP00000017559	ENSLOCP00000017476	Calcium voltage-gated channel auxiliary subunit alpha2delta 2.	Calcium channel, voltage dependent, alpha2/delta subunit 3.	0.925
CACNA2D2	cacnb1	ENSLOCP00000017559	ENSLOCP00000015763	Calcium voltage-gated channel auxiliary subunit alpha2delta 2.	Calcium channel, voltage-dependent, beta 1 subunit.	0.989
CACNA2D2	cacnb2	ENSLOCP00000017559	ENSLOCP00000013336	Calcium voltage-gated channel auxiliary subunit alpha2delta 2.	Calcium voltage-gated channel auxiliary subunit beta 2.	0.989
CACNA2D2	cacnb4	ENSLOCP00000017559	ENSLOCP00000003025	Calcium voltage-gated channel auxiliary subunit alpha2delta 2.	Calcium channel, voltage-dependent, beta 4a subunit.	0.989
W5M0J9_LEPOC	CACNA2D2	ENSLOCP00000001906	ENSLOCP00000017559	Voltage-dependent N-type calcium channel subunit alpha; Voltage-sensitive calcium channels (VSCC) mediate the entry of calcium ions into excitable cells and are also involved in a variety of calcium-dependent processes, including muscle contraction, hormone or neurotransmitter release, gene expression, cell motility, cell division and cell death. The isoform alpha-1B gives rise to N-type calcium currents.	Calcium voltage-gated channel auxiliary subunit alpha2delta 2.	0.983
W5M0J9_LEPOC	W5MKU2_LEPOC	ENSLOCP00000001906	ENSLOCP00000009001	Voltage-dependent N-type calcium channel subunit alpha; Voltage-sensitive calcium channels (VSCC) mediate the entry of calcium ions into excitable cells and are also involved in a variety of calcium-dependent processes, including muscle contraction, hormone or neurotransmitter release, gene expression, cell motility, cell division and cell death. The isoform alpha-1B gives rise to N-type calcium currents.	Calcium channel, voltage-dependent, beta 3a.	0.964
W5M0J9_LEPOC	W5N0U1_LEPOC	ENSLOCP00000001906	ENSLOCP00000014250	Voltage-dependent N-type calcium channel subunit alpha; Voltage-sensitive calcium channels (VSCC) mediate the entry of calcium ions into excitable cells and are also involved in a variety of calcium-dependent processes, including muscle contraction, hormone or neurotransmitter release, gene expression, cell motility, cell division and cell death. The isoform alpha-1B gives rise to N-type calcium currents.	Voltage-dependent L-type calcium channel subunit alpha; Voltage-sensitive calcium channels (VSCC) mediate the entry of calcium ions into excitable cells and are also involved in a variety of calcium-dependent processes, including muscle contraction, hormone or neurotransmitter release, gene expression, cell motility, cell division and cell death; Belongs to the calcium channel alpha-1 subunit (TC 1.A.1.11) family.	0.946
W5M0J9_LEPOC	W5N9W6_LEPOC	ENSLOCP00000001906	ENSLOCP00000017425	Voltage-dependent N-type calcium channel subunit alpha; Voltage-sensitive calcium channels (VSCC) mediate the entry of calcium ions into excitable cells and are also involved in a variety of calcium-dependent processes, including muscle contraction, hormone or neurotransmitter release, gene expression, cell motility, cell division and cell death. The isoform alpha-1B gives rise to N-type calcium currents.	Voltage-dependent L-type calcium channel subunit alpha; Voltage-sensitive calcium channels (VSCC) mediate the entry of calcium ions into excitable cells and are also involved in a variety of calcium-dependent processes, including muscle contraction, hormone or neurotransmitter release, gene expression, cell motility, cell division and cell death; Belongs to the calcium channel alpha-1 subunit (TC 1.A.1.11) family.	0.947
W5M0J9_LEPOC	W5NIS7_LEPOC	ENSLOCP00000001906	ENSLOCP00000020536	Voltage-dependent N-type calcium channel subunit alpha; Voltage-sensitive calcium channels (VSCC) mediate the entry of calcium ions into excitable cells and are also involved in a variety of calcium-dependent processes, including muscle contraction, hormone or neurotransmitter release, gene expression, cell motility, cell division and cell death. The isoform alpha-1B gives rise to N-type calcium currents.	Voltage-dependent L-type calcium channel subunit alpha; Voltage-sensitive calcium channels (VSCC) mediate the entry of calcium ions into excitable cells and are also involved in a variety of calcium-dependent processes, including muscle contraction, hormone or neurotransmitter release, gene expression, cell motility, cell division and cell death; Belongs to the calcium channel alpha-1 subunit (TC 1.A.1.11) family.	0.946
W5M0J9_LEPOC	W5NIU3_LEPOC	ENSLOCP00000001906	ENSLOCP00000020552	Voltage-dependent N-type calcium channel subunit alpha; Voltage-sensitive calcium channels (VSCC) mediate the entry of calcium ions into excitable cells and are also involved in a variety of calcium-dependent processes, including muscle contraction, hormone or neurotransmitter release, gene expression, cell motility, cell division and cell death. The isoform alpha-1B gives rise to N-type calcium currents.	Calcium channel, voltage-dependent, alpha 2/delta subunit 4a.	0.964
W5M0J9_LEPOC	cacna2d3	ENSLOCP00000001906	ENSLOCP00000017476	Voltage-dependent N-type calcium channel subunit alpha; Voltage-sensitive calcium channels (VSCC) mediate the entry of calcium ions into excitable cells and are also involved in a variety of calcium-dependent processes, including muscle contraction, hormone or neurotransmitter release, gene expression, cell motility, cell division and cell death. The isoform alpha-1B gives rise to N-type calcium currents.	Calcium channel, voltage dependent, alpha2/delta subunit 3.	0.964
W5M0J9_LEPOC	cacnb1	ENSLOCP00000001906	ENSLOCP00000015763	Voltage-dependent N-type calcium channel subunit alpha; Voltage-sensitive calcium channels (VSCC) mediate the entry of calcium ions into excitable cells and are also involved in a variety of calcium-dependent processes, including muscle contraction, hormone or neurotransmitter release, gene expression, cell motility, cell division and cell death. The isoform alpha-1B gives rise to N-type calcium currents.	Calcium channel, voltage-dependent, beta 1 subunit.	0.974
W5M0J9_LEPOC	cacnb2	ENSLOCP00000001906	ENSLOCP00000013336	Voltage-dependent N-type calcium channel subunit alpha; Voltage-sensitive calcium channels (VSCC) mediate the entry of calcium ions into excitable cells and are also involved in a variety of calcium-dependent processes, including muscle contraction, hormone or neurotransmitter release, gene expression, cell motility, cell division and cell death. The isoform alpha-1B gives rise to N-type calcium currents.	Calcium voltage-gated channel auxiliary subunit beta 2.	0.964
W5M0J9_LEPOC	cacnb4	ENSLOCP00000001906	ENSLOCP00000003025	Voltage-dependent N-type calcium channel subunit alpha; Voltage-sensitive calcium channels (VSCC) mediate the entry of calcium ions into excitable cells and are also involved in a variety of calcium-dependent processes, including muscle contraction, hormone or neurotransmitter release, gene expression, cell motility, cell division and cell death. The isoform alpha-1B gives rise to N-type calcium currents.	Calcium channel, voltage-dependent, beta 4a subunit.	0.974

page 1 of 6

Server load: low (18%) [HD]

Permalink

Network

Co-occurrence

Experiments

Co-expression

Databases

Neighborhood

Textmining

Fusion

© STRING Consortium 2026

Credits

Access

Info

About