Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
b4gat1Beta-1,4-glucuronyltransferase 1. (432 aa)    
Predicted Functional Partners:
LOC102687398
LARGE xylosyl- and glucuronyltransferase 2.
  
 
0.985
LARGE1
LARGE xylosyl- and glucuronyltransferase 1.
  
 
0.985
rxylt1
Ribitol xylosyltransferase 1.
     
 0.984
pomk
Protein O-mannose kinase.
      
 0.864
pomgnt2
Protein O-linked mannose N-acetylglucosaminyltransferase 2 (beta 1,4-).
      
 0.863
b3galnt2
Hexosyltransferase.
     
 0.829
W5MGM1_LEPOC
Protein-O-mannosyltransferase 1.
    
 
 0.774
dag1
Dystroglycan 1.
     
 0.731
W5NDW5_LEPOC
Peptidase S72 domain-containing protein.
     
 0.731
fktn
Fukutin.
    
 
 0.729
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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