Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
arfrp1ADP-ribosylation factor related protein 1. (204 aa)    
Predicted Functional Partners:
sys1
Protein SYS1 homolog; Involved in protein trafficking. Belongs to the SYS1 family.
   
 
 0.970
cog8
Conserved oligomeric Golgi complex subunit 8; Belongs to the COG8 family.
   
 0.966
cog6
Conserved oligomeric Golgi complex subunit 6; Required for normal Golgi function.
    
 0.947
rab6a
RAB6A, member RAS oncogene family.
    
 0.933
rab41
RAB41, member RAS oncogene family.
    
 0.933
stx16
Syntaxin 16.
    
 0.931
RIC1
RIC1 homolog, RAB6A GEF complex partner 1.
    
 0.895
W5NDJ0_LEPOC
ADP-ribosylation factor-like 1.
    
 0.890
mon2
MON2 homolog, regulator of endosome-to-Golgi trafficking.
    
 
 0.884
tmf1
TATA element modulatory factor 1.
     
 0.875
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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