Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TNFRSF6BTNF receptor superfamily member 6b. (285 aa)    
Predicted Functional Partners:
faslg
Fas ligand (TNF superfamily, member 6); Belongs to the tumor necrosis factor family.
    
 0.996
LOC102684262
TNF superfamily member 14; Belongs to the tumor necrosis factor family.
    
 0.987
W5MR18_LEPOC
TNF_2 domain-containing protein; Belongs to the tumor necrosis factor family.
    
 0.987
W5MR42_LEPOC
TNF_2 domain-containing protein; Belongs to the tumor necrosis factor family.
    
 0.987
TNFSF15
TNF superfamily member 15.
   
 0.969
LOC102686972
Uncharacterized protein.
  
  
 
0.906
tnfsf11
TNF superfamily member 11; Belongs to the tumor necrosis factor family.
    
 0.653
CD40LG
CD40 ligand; Belongs to the tumor necrosis factor family.
    
 0.639
W5LX48_LEPOC
TNF_2 domain-containing protein.
   
 0.565
LOC107079404
Ig-like domain-containing protein.
    
 0.561
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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