STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
W5M0N5_LEPOCSi:ch211-262i1.6. (157 aa)    
Predicted Functional Partners:
mst1r
Macrophage stimulating 1 receptor b.
   
 0.744
met
MET proto-oncogene, receptor tyrosine kinase.
   
 0.744
nck1
Cytoplasmic protein.
    
 0.604
nck2
Cytoplasmic protein.
    
 0.604
LOC102692225
Neurotrophin receptor associated death domain.
     
 0.541
git2
G protein-coupled receptor kinase interacting ArfGAP 2a.
     
 0.465
W5MHQ5_LEPOC
G protein-coupled receptor kinase interacting ArfGAP 1.
     
 0.465
fadd
Fas associated via death domain.
   
  0.461
W5M7P2_LEPOC
Erb-b2 receptor tyrosine kinase 3b.
    
  0.442
W5MAN3_LEPOC
Receptor protein-tyrosine kinase.
    
  0.442
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.