Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
W5M0N5_LEPOCSi:ch211-262i1.6. (157 aa)    
Predicted Functional Partners:
W5M196_LEPOC
WD repeat domain 18.
      
 0.634
lrrcc1
Leucine rich repeat and coiled-coil centrosomal protein 1.
      
 0.626
W5MCF8_LEPOC
Midnolin.
      
 0.618
tmem259
Transmembrane protein 259.
      
 0.606
polr2e
RNA polymerase II subunit E.
      
 0.606
ncapd3
Condensin-2 complex subunit D3; Regulatory subunit of the condensin-2 complex, a complex which establishes mitotic chromosome architecture and is involved in physical rigidity of the chromatid axis.
      
 0.561
vps26b
VPS26, retromer complex component B.
      
 0.556
dazap1
DAZ associated protein 1.
      
 0.525
grin3b
Glutamate receptor, ionotropic, N-methyl-D-aspartate 3Bb.
      
 0.518
thyn1
Thymocyte nuclear protein 1.
      
 0.518
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.