Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
riok3Serine/threonine-protein kinase RIO3; Belongs to the protein kinase superfamily. RIO-type Ser/Thr kinase family. (511 aa)    
Predicted Functional Partners:
ltv1
LTV1 ribosome biogenesis factor.
   
 0.998
nob1
RNA-binding protein NOB1; May play a role in mRNA degradation. Belongs to the NOB1 family.
   
 0.996
riok1
Serine/threonine-protein kinase RIO1; Belongs to the protein kinase superfamily. RIO-type Ser/Thr kinase family.
  
 
0.990
riok2
RIO kinase 2 (yeast).
   
0.987
bysl
Bystin-like.
   
 0.987
TSR1
TSR1 ribosome maturation factor.
   
 0.964
pno1
Partner of NOB1 homolog.
   
 0.934
W5MMW6_LEPOC
Ribosomal protein S9.
   
  0.930
W5LXF3_LEPOC
Ribosomal_S7 domain-containing protein.
   
 0.928
rps2
Ribosomal protein S2; Belongs to the universal ribosomal protein uS5 family.
    
 0.928
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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