Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
W5M0P2_LEPOCTudor domain containing 12. (1374 aa)    
Predicted Functional Partners:
pes1
Pescadillo homolog; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome.
   
 0.880
piwil2
Piwi-like RNA-mediated gene silencing 2; Belongs to the argonaute family.
    
 0.872
tdrd1
Tudor domain containing 1.
    
 0.859
asz1
Ankyrin repeat, SAM and basic leucine zipper domain containing 1.
   
 0.857
W5MRP2_LEPOC
Uncharacterized protein.
    
 0.817
W5MV27_LEPOC
Tudor domain containing 9.
  
 0.817
W5NIA3_LEPOC
Tudor domain containing 6.
    
 0.816
fkbp6
Peptidylprolyl isomerase.
    
 0.769
RANBP2
RAN binding protein 2.
  
 0.759
mov10
Moloney leukemia virus 10b, tandem duplicate 1.
    
 0.758
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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