Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
sacsSacsin molecular chaperone. (4590 aa)    
Predicted Functional Partners:
apaf1
Apoptotic protease-activating factor 1; Oligomeric Apaf-1 mediates the cytochrome c-dependent autocatalytic activation of pro-caspase-9 (Apaf-3), leading to the activation of caspase-3 and apoptosis. This activation requires ATP.
   
 0.741
aurka
Aurora kinase A; Belongs to the protein kinase superfamily.
   
 0.717
aurkb
Aurora kinase B; Belongs to the protein kinase superfamily.
   
 0.717
W5MJ86_LEPOC
Uncharacterized protein.
   
 0.704
W5MFS7_LEPOC
Cell division cycle associated 8.
   
 0.689
ATP5F1B
ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane.
   
 0.689
ANKRD26
Ankyrin repeat domain 26.
    
 
 0.630
W5MSZ0_LEPOC
Zinc finger, AN1-type domain 4.
    
 0.599
rnf216
Ring finger protein 216.
    
 0.588
mad2l1
MAD2 mitotic arrest deficient-like 1 (yeast).
   
 
 0.585
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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