STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
nap1l4Nucleosome assembly protein 1-like 4b; Belongs to the nucleosome assembly protein (NAP) family. (370 aa)    
Predicted Functional Partners:
W5MZ39_LEPOC
40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family.
   
 
 0.869
ipo9
Importin 9.
   
 
 0.862
H2AZ1
Histone H2A; Belongs to the histone H2A family.
   
 
 0.858
W5NDT6_LEPOC
Histone H2A; Belongs to the histone H2A family.
   
 
 0.858
W5M9C4_LEPOC
Protein SDA1; Required for 60S pre-ribosomal subunits export to the cytoplasm; Belongs to the SDA1 family.
    
 
 0.817
W5MJK0_LEPOC
Histone H2B; Belongs to the histone H2B family.
    
 
 0.809
W5NLL5_LEPOC
Histone H2B; Belongs to the histone H2B family.
    
 
 0.809
LOC102694187
Histone H2A; Belongs to the histone H2A family.
    
 
 0.807
brsk2
BR serine/threonine kinase 2b.
 
  
 
 0.801
W5NDP0_LEPOC
Ribosomal protein L39.
   
 
 0.795
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.