Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC102699044Transmembrane 4 L six family member 18. (206 aa)    
Predicted Functional Partners:
W5NHR4_LEPOC
Leucine-rich repeats and IQ motif containing 1.
      
 0.534
W5ME26_LEPOC
Uncharacterized protein.
      
 0.525
stra8
Uncharacterized protein.
      
 0.522
W5MXE6_LEPOC
Uncharacterized protein.
      
 0.510
LOC102684762
S100 calcium binding protein A11.
      
 0.478
PDE6G
Phosphodiesterase 6G.
  
    0.431
LOC102683190
Bone morphogenetic protein/retinoic acid inducible neural-specific 2.
  
     0.427
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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