Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
W5M0Q8_LEPOCLIM zinc-binding domain-containing protein. (147 aa)    
Predicted Functional Partners:
W5MAE7_LEPOC
Vinculin a.
    
 0.952
W5MAG4_LEPOC
Uncharacterized protein.
    
 0.952
W5MLW0_LEPOC
Protein tyrosine kinase 2aa.
    
 0.931
PXN
Paxillin.
 
     0.927
ptk2b
Protein tyrosine kinase 2 beta, b; Belongs to the protein kinase superfamily. Tyr protein kinase family.
    
 0.920
parva
Parvin, alpha b.
    
 0.905
W5NE51_LEPOC
Parvin, beta.
    
 0.902
W5MTJ8_LEPOC
Integrin-linked kinase.
   
 
 0.890
crkl
V-crk avian sarcoma virus CT10 oncogene homolog-like.
    
 0.873
W5MJT7_LEPOC
V-crk avian sarcoma virus CT10 oncogene homolog.
    
 0.873
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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