STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
W5M0Q8_LEPOCLIM zinc-binding domain-containing protein. (147 aa)    
Predicted Functional Partners:
W5MLW0_LEPOC
Protein tyrosine kinase 2aa.
    
 0.949
W5MHQ5_LEPOC
G protein-coupled receptor kinase interacting ArfGAP 1.
    
 0.942
PXN
Paxillin.
 
     0.927
parva
Parvin, alpha b.
   
 0.921
W5NE51_LEPOC
Parvin, beta.
   
 0.921
W5MTJ8_LEPOC
Integrin-linked kinase.
   
 0.909
W5MAE7_LEPOC
Vinculin a.
   
 0.904
W5MAG4_LEPOC
Uncharacterized protein.
   
 0.904
ptk2b
Protein tyrosine kinase 2 beta, b; Belongs to the protein kinase superfamily. Tyr protein kinase family.
    
 0.895
crkl
V-crk avian sarcoma virus CT10 oncogene homolog-like.
    
 0.885
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
Server load: low (32%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.