Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ptbp1Polypyrimidine tract binding protein 1b. (568 aa)    
Predicted Functional Partners:
hnrnpk
Heterogeneous nuclear ribonucleoprotein K, like.
   
 0.932
hnrnpc
Heterogeneous nuclear ribonucleoprotein C.
   
 0.896
W5NAG4_LEPOC
Heterogeneous nuclear ribonucleoprotein L.
   
 0.871
HNRNPLL
Heterogeneous nuclear ribonucleoprotein L like.
   
 0.871
elavl1
ELAV-like protein; Belongs to the RRM elav family.
   
 0.816
ncbp2
Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing, translation regulation, nonsense- mediated mRNA decay, RNA-mediated gene silencing (RNAi) by microRNAs (miRNAs) and mRNA export. The CBC complex is involved in mRNA export from the nucleus, leading to the recruitment of the mRNA export machinery to the 5' end of mRNA and to mRNA export in a 5' to 3' direction through the nuclear pore. The CBC complex is also involved in mediating U [...]
    
 0.779
hnrnpa1
Uncharacterized protein.
   
 0.758
W5MJA0_LEPOC
Heterogeneous nuclear ribonucleoprotein A3.
   
 0.758
W5N2Q4_LEPOC
Uncharacterized protein.
   
 0.758
hnrnpr
Heterogeneous nuclear ribonucleoprotein R.
   
 0.746
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
Server load: low (34%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.